Difference between revisions of "CometWiki"
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Welcome to CometWiki. This site describes the set up and usage of `comet' the actin-based motility simulator. | Welcome to CometWiki. This site describes the set up and usage of `comet' the actin-based motility simulator. | ||
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| + | ==Examples== | ||
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| + | *[http://www.dayel.com/comet/supmat/movies/ Example simulation run 2D (from Figure 1 in paper)] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS3_Fig1vtkx1.mov 3D links view of above example] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS5a_radial_report_force.mov Forces and link breaks during symmetry breaking] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS5bSmoothMotilityLink_breaks.mov Link breaks during smooth motility] | ||
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| + | *[http://www.dayel.com/comet/supmat/movies/FigS4a_circ_measure_vtk_.mov Circumferential measurements during symmetry breaking] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS4b_radial_measure_vtk_.mov Radial measurements during symmetry breaking] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS6a_vtk_smooth_circ_trimmed.mov Circumferential measurements during smooth motilty] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS6b_vtk_radial_trimmed.mov Radial measurements during smooth motilty] | ||
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| + | *[http://www.dayel.com/comet/supmat/movies/FigS7a_Ellipsoid_vtk_.mov Sideways symmetry breaking of ellipsoid (3D)] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS7b_Symmetric_Capsule.mov Sideways symmetry breaking of capsule (2D)] | ||
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| + | *[http://www.dayel.com/comet/supmat/movies/FigS8_MM2-Rx6-01.mov 3D reconstruction of in vitro shell constrained between slide and coverslip #1] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS8_MM2-Rx6-03.mov 3D reconstruction of in vitro shell constrained between slide and coverslip #2] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS8_SquashedShell1.mov 3D reconstruction of in vitro shell constrained between slide and coverslip #3] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS8_SquashedShell2.mov 3D reconstruction of in vitro shell constrained between slide and coverslip #4] | ||
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| + | *[http://www.dayel.com/comet/supmat/movies/FigS9_MM2-Rx4-01.mov 3D reconstruction of in vitro shell constrained between slide and coverslip #1] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS9_MM2-Rx5-04_2.mov 3D reconstruction of in vitro shell constrained between slide and coverslip #2] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS9_MM2-Rx5-05_3.mov 3D reconstruction of in vitro shell constrained between slide and coverslip #3] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS9_MM2-Rx5-06.mov 3D reconstruction of in vitro shell constrained between slide and coverslip #4] | ||
| + | *[http://www.dayel.com/comet/supmat/movies/FigS9_MM2-Rx5-06_1.mov 3D reconstruction of in vitro shell constrained between slide and coverslip #5] | ||
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Revision as of 17:53, 10 April 2009
CometWiki
Welcome to CometWiki. This site describes the set up and usage of `comet' the actin-based motility simulator.
Examples
- Example simulation run 2D (from Figure 1 in paper)
- 3D links view of above example
- Forces and link breaks during symmetry breaking
- Link breaks during smooth motility
- Circumferential measurements during symmetry breaking
- Radial measurements during symmetry breaking
- Circumferential measurements during smooth motilty
- Radial measurements during smooth motilty
- 3D reconstruction of in vitro shell constrained between slide and coverslip #1
- 3D reconstruction of in vitro shell constrained between slide and coverslip #2
- 3D reconstruction of in vitro shell constrained between slide and coverslip #3
- 3D reconstruction of in vitro shell constrained between slide and coverslip #4
- 3D reconstruction of in vitro shell constrained between slide and coverslip #1
- 3D reconstruction of in vitro shell constrained between slide and coverslip #2
- 3D reconstruction of in vitro shell constrained between slide and coverslip #3
- 3D reconstruction of in vitro shell constrained between slide and coverslip #4
- 3D reconstruction of in vitro shell constrained between slide and coverslip #5
Usage
InstallingYou can download Running the programSettings
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Scripts |
